Selected Articles

2024

Surface optimization of nanodiamonds using non-thermal plasma

Gulka, M., Balasubramanian, P., Shagieva, E., Copak, J., Khun, J., Scholtz, V., Jelezko, F., Stehlik, S., Cigler, P.
Carbon. 2024, 119062

Design Rules for the Nano-Bio Interface of Nanodiamonds: Implications for siRNA Vectorization

Kindermann, M., Neburkova, J., Neuhoferova, E., Majer, J., Stejfova, J., Benson, V., Cigler, P.
Adv. Funct. Mater. 2024, 2314088

Light-Responsive Hydrogel Microcrawlers, Powered and Steered with Spatially Homogeneous Illumination

Kropacek, J., Maslen, C., Gidoni, P., Cigler, P., Stepanek, F., Rehor, I.
Soft Robotics 2024, 10.1089/soro.2023.0074

Cellular Uptake and Fate of Cationic Polymer-Coated Nanodiamonds Delivering siRNA: A Mechanistic Study

Majer, J., Kindermann, M., Pinkas, D., Chvátil, D., Cigler, P., Libusova, L.
Nanoscale 2024, 10.1039/D3NR05738K

2023

Hydrogel Microrobots Self-Assembled into Ordered Structures with Programmable Actuation

Kropacek, J., Maslen, C., van Dijk, B., Iniguez-Rabago, A., Overvelde, J.T.B., Zubov, A., Vrba, J., Cigler, P., Stepanek, F. and Rehor, I.
Adv. Intell. Syst. 2023, 2300096

Fluorescent HPHT nanodiamonds have disk- and rod-like shapes

Eldemrdash, S., Thalassinos, G., Alzahrani, A., Sun, Q., Walsh, E., Grant, E., Abe, H., Greaves, T. L., Ohshima, T., Cigler, P., Matějíček, P., Simpson, D. A., Greentree, A. D., Bryant, G., Gibson, B. C., Reineck, P.
Carbon 2023, 268-276

The role of the DE and EF loop of BKPyV VP1 in the serological cross-reactivity between subtypes

Hejtmánková, A., Caisová, H., Tomanová, T., Španielová, H.
Virus Research 2023, 199031

Exploiting ionization dynamics in the nitrogen vacancy center for rapid, high-contrast spin, and charge state initialization

Wirtitsch, D., Wachter, G., Reisenbauer, S., Gulka, M., Ivády, V., Jelezko, F., Gali, A., Nesladek, M., Trupke, M.
Phys. Rev. Research 2023, 013014

Towards site-specific emission enhancement of gold nanoclusters using plasmonic systems: advantages and limitations

Pavelka, O., Dyakov, S., Kvakova,K., Vesely, J., Cigler, P., Valenta, J.
Nanoscale 2023, 3351-3365

2022

A New Class of Single-Material, Non-Reciprocal Microactuators

Maslen, C., Gholamipour-Shirazi, A., Butler, M. D., Kropacek, J., Rehor, I., Montenegro-Johnson, T.
Macromol. Rapid Commun. 2022, 2200842

Diamond Surfaces with Clickable Antifouling Polymer Coating for Microarray-Based Biosensing

Kumar, R., Yang, B., Barton, J., Stejfova, M., Schäfer, A., König, M., Knittel, P., Cigler, P., Hirtz, M.
Adv. Mater. Interfaces 2022, 2201453

Single-Particle Tracking and Trajectory Analysis of Fluorescent Nanodiamonds in Cell-Free Environment and Live Cells

Sigaeva, A., Hochstetter, A., Bouyim, S., Chipaux, M., Stejfova, M., Cigler, P., Schirhagl, R.
Small 2022, 2201395

Nanodiamond–Quantum Sensors Reveal Temperature Variation Associated to Hippocampal Neurons Firing

Petrini, G., Tomagra, G., Bernardi, E., Moreva, E., Traina, P., Marcantoni, A., Picollo, F., Kvaková, K., Cígler, P., Degiovanni, I. P., Carabelli, V., Genovese, M.
Adv. Sci. 2022, 2202014

Nanodiamonds as traps for fibroblast growth factors: Parameters influencing the interaction

Mikesova,J., Miliaieva, D., Stenclova, P., Kindermann, M., Vuckova, T., Madlikova, M., Fabry, M., Veverka, V., Schimer, J., Krejci, P., Stehlik, S., Cigler, P.
Carbon 2022, 195, 372-386

Visualization of Sentinel Lymph Nodes with Mannosylated Fluorescent Nanodiamonds

Kvakova, K., Ondra, M., Schimer, J., Petrik, M., Novy, Z., Raabova, H., Hajduch, M., Cigler, P.
Adv. Funct. Mater. 2022, 32, 2109960

Magnetic field sensitivity of the photoelectrically read nitrogen-vacancy centers in diamond

Hruby, J., Gulka, M., Mongillo, M., Radu, I. P., Petrov, M. V., Bourgeois, E., Nesladek, M.
Appl. Phys. Lett. 2022, 120162402

Optically Coupled Gold Nanostructures: Plasmon Enhanced Luminescence from Gold Nanorod-Nanocluster Hybrids

Pavelka,O., Kvakova, K., Vesely, J., Mizera, J., Cigler, P., Valenta, J.
Nanoscale 2022, 14, 3166-3178

Metastable Brominated Nanodiamond Surface Enables Room Temperature and Catalysis-Free Amine Chemistry

Melendrez, C., Lopez-Rosas, J.A., Stokes, C.X., Cheung, T.C., Lee, S.J., Titus, C.J., Valenzuela, J., Jeanpierre, G., Muhammad, H., Tran, P., Sandoval, P.J., Supreme, T., Altoe, V., Vavra, J., Raabova, H., Vanek, V., Sainio, S., Doriese, W.B., O’Neil, G.C., Swetz, D.S., Ullom, J. N., Irwin,K., Nordlund, D., Cigler,P., and Wolcott, A.
J. Phys. Chem. Lett. 2022, 13, 1147–1158

Quantum Sensing of Free Radicals in Primary Human Dendritic Cells

Nie, L., Nusantara, A.C., Damle ,V.G., Baranov, M.V., Chipaux, M., Reyes-San-Martin,C., Hamoh, T., Epperla, C.P., Guricova, M., Cigler,P., van den Bogaart, G., Schirhagl,R.
Nano Lett. 2022, 22, 1818–1825

2021

VirPorters: Insights into the action of cationic and histidine-rich cell-penetrating peptides

Váňová, J., Číhařová, B., Hejtmánková, A., Epperla, C.P., Škvára, P., Forstová, J., Hubálek Kalbáčová, M., Španielová, H.
Int J Pharm. 2021, 121308.

Lipid Nanoparticles for Broad-Spectrum Nucleic Acid Delivery

Hejdankova, Z., Vanek, V., Sedlak, F., Prochazka, J., Diederichs, A., Kereïche, S., Novotna, B., Budesinsky, M., Birkus, G., Grantz Saskova, K., Cigler, P.
Adv. Funct. Mater. 2021, 2101321.

Room-temperature control and electrical readout of individual nitrogen-vacancy nuclear spins

Gulka, M., Wirtitsch, D., Ivády, V., Vodnik, J., Hruby, J., Magchiels, G., Bourgeois, E., Gali, A., Trupke, M., Nesladek, M.
Nat Commun 2021, 12, 4421.

Toward Quantitative Bio-sensing with Nitrogen–Vacancy Center in Diamond

Zhang, T., Pramanik, G., Zhang, K., Gulka, M., Wang, L., Jing, J., Xu, F., Li, Z., Wei, Q., Cigler, P., Chu, Z.
ACS Sens. 2021, 6, 2077–2107.

Inverse heavy-atom effect in near infrared photoluminescent gold nanoclusters

Pramanik, G., Kvakova, K., Thottappali, M. A., Rais, D., Pfleger, J., Greben, M., El-Zoka, A., Bals, S., Dracinsky, M., Valenta, J., Cigler, P.
Nanoscale 2021, 13, 10462-10467.

A Label-Free Diamond Microfluidic DNA Sensor Based on Active Nitrogen-Vacancy Center Charge State Control

Krečmarová, M., Gulka, M., Vandenryt, T., Hrubý, J., Fekete, L., Hubík, P., Taylor, A., Mortet, V., Thoelen, R., Bourgeois, E., Nesládek, M.
ACS Applied Materials and Interfaces 2021, 13, 18500-18510

Friction-directed self-assembly of Janus lithographic microgels into anisotropic 2D structures

Kodakkadan, Y. N. V., Maslen, Ch., Cigler, P., Štěpánek, F., Rehor, I.
J. Mater. Chem. B 2021, 9, 4718-4725.

Reversible photo- and thermal-effects on the luminescence of gold nanoclusters: implications for nanothermometry

Valenta, J., Greben, M., Pramanik, G., Kvakova, K., Cigler, P.
Phys. Chem. Chem. Phys. 2021, 23, 11954-11960.

Harnessing subcellular-resolved organ distribution of cationic copolymer-functionalized fluorescent nanodiamonds for optimal delivery of active siRNA to a xenografted tumor in mice

Claveau, S., Kindermann,M., Papine,A., Díaz-Riascos, Z. V., Délen, X., Georges, P., López-Alemany, R., Martínez Tirado,O., Bertrand, J. R., Abasolo,I., Cigler, P., Treussart, F.
Nanoscale 2021, 13, 9280-9292.

2020

Formation of gadolinium-ferritin from clinical magnetic resonance contrast agents

Neburkova, J., Rulseh, A. M., Chang, S. LY, Raabová, H., Vejpravova, J., Dracinsky, M., Tarabek, J., Kotek, J., Pingle, J. M., Majer, P., Vymazal, J., Cigler, P.
Nanoscale Adv. 2020, 2, 5567-5571.

Simultaneous label-free live imaging of cell nucleus and luminescent nanodiamonds

Gulka, M., Salehi,H., Varga, B., Middendorp, E., Pall, O., Raabova, H., Cloitre, T., Cuisinier, F. J. G., Cigler, P., Nesladek, M., Gergely, C.
Sci. Rep. 2020, 10, 9791.

Nanoscale Dynamic Readout of a Chemical Redox Process Using Radicals Coupled with Nitrogen-Vacancy Centers in Nanodiamonds

Barton, J., Gulka, M., Tarabek, J., Mindarava, Y., Wang, Z., Schimer, J., Raabova, H., Bednar, J., Plenio, M. B., Jelezko, F., Nesladek, M., Cigler, P.
ACS Nano 2020, 14, 12938–12950.

.

The protein corona does not influence receptor-mediated targeting of virus-like particles

Zackova Suchanova, J., Hejtmanková, A., Neburkova, J., Cigler, P., Forstova, J., Spanielova, H.
Bioconjugate Chem. 2020, https://doi.org/10.1021/acs.bioconjchem.0c00240.

Arbitrarily-shaped microgels composed of chemically unmodified biopolymers

Kodakkadan, Y. N. V., Idzakovicova, K., Sepitka,J., ten Napel, D., Safai, E., Cigler, P., Stepanek, F., Rehor, I.
Biomater. Sci. 2020, https://doi.org/10.1039/C9BM02056J.

Synthesis of Near-Infrared Emitting Gold Nanoclusters for Biological Applications

Pramanik, G., Keprova, A., Valenta, J., Bocan, V., Kvaková, K., Libusova, L., Cigler, P.
J. Vis. Exp. 2020, e60388, doi:10.3791/60388.

2019

Diamond nano-optode for fluorescent measurements of pH and temperature

Rabova, H., Chvatil, D., Cigler., P.
Nanoscale 2019, 11, 18537.

Inhibitor–Polymer Conjugates as a Versatile Tool for Detection and Visualization of Cancer-Associated Carbonic Anhydrase Isoforms

Pospisilová, K., Knedlik, T., Sacha, P., Kostka, L., Schimer, J., Brynda, J., Kral, V., Cigler, P., Navratil, V., Etrych,T., Subr, V., Kugler, M., Fabry, M., Rezacova, P., Konvalinka, J.
ACS Omega 2019, 4, 6746.

Using Polymers to Enhance the Carbon Nanomaterial Biointerface

Pramanik, G., Neburkova, J., Vanek, V., Jani, M., Kindermann, M., Cigler, P.
In Carbon Nanomaterials for Bioimaging, Bioanalysis, and Therapy, Y. Y. Hui, H.-C. Chang, H. Dong, X. Zhang (eds.),Wiley, 2019, pp. 15-42.

Not All Fluorescent Nanodiamonds Are Created Equal: A Comparative Study

Reineck, P., Trindade, L. F., Havlik, J., Stursa, J., Heffernan, A., Elbourne, A., Orth, A., Capelli, M., Cigler, P., Simpson, D. A., Gibson, B. C.
Part. Part. Syst. Charact. 2019, 36, 1900009.

2018

Extremely rapid isotropic irradiation of nanoparticles with ions generated in situ by a nuclear reaction

Havlik, J., Petrakova, V., Kucka, J., Raabova, H., Panek, D., Stepan, V., Zlamalova Cilova, Z., Reineck, P., Stursa, J., Kucera, J., Hruby, M., Cigler, P.
Nat. Commun. 2018, 9, 4467.

Supported Lipid Bilayers on Fluorescent Nanodiamonds: A Structurally Defined and Versatile Coating for Bioapplications

Vavra, J., Rehor, I., Rendler, T., Jani, M., Bednar, J., Baksh, M. M., Zappe, A., Wrachtrup, J., Cigler, P.
Adv. Func. Mater. 2018, 28, 1803406.

Proton Gradient Driven Oriented Motion of Nanodiamonds Grafted to Graphene by Dynamic Covalent Bonds

Kovaricek, P., Cebecauer, M., Neburková, J., Barton, J., Fridrichová, M., Drogowska, K. A., Cigler, P., Lehn, J.-M., Kalbac, M.
ACS Nano 2018, 12, 7141–7147.

Nanodiamonds as “artificial proteins”: Regulation of a cell signalling system using low nanomolar solutions of inorganic nanocrystals

Balek, L., Buchtova, M., Kunova Bosakova, M., Varecha, M., Foldynova-Trantirkova, S., Gudernova, I., Vesela, I., Havlik, J., Neburkova, J., Turner, S., Krzyscik, M. A., Zakrzewska, M., Klimaschewski, L., Claus, P., Trantirek, P., Cigler, P., Krejci, P.
Biomaterials 2018, 176, 106–121.

Chemical modification of diamond surface by a donor–acceptor organic chromophore (P1): Optimization of surface chemistry and electronic properties of diamond

Barton, J., Krysova, H., Janda, P., Tarabkova, H., Ashcheulov, P., Mortet, V., Taylor, A., Vavra, J., Cigler, P., Kavan, L.
App. Mat. Today 2018, 12, 153–162.

Inhibitor-GCPII interaction: selective and robust system for targeting cancer cells with structurally diverse nanoparticles

Neburkova, J., Sedlak, F., Zackova Suchanova, J., Kostka, L., Sacha, P., Šubr, V., Etrych, T., Simon, P., Barinkova, J., Krystufek, R., Spanielova, H., Forstova, J., Konvalinka, J., Cigler, P.
Mol. Pharmaceutics, 15, 2932–2945.

Gold Nanoclusters with Bright Near-Infrared Photoluminescence

Pramanik, G., Humpolickova, J., Valenta, J., Kundu, P., Bals, S., Bour, P., Dracinsky, M., Cigler, P.
Nanoscale 2018, 10, 3792–3798.

2017

Targeting Glioma Cancer Cells with Fluorescent Nanodiamonds via Integrin Receptors

Neburkova J., Hajek M., Rehor I., Schimer J., Sedlak F., Stursa J., Hruby M., Cigler P.
In Methods in Pharmacology and Toxicology, Humana Press, 2017, DOI: 10.1007/7653_2017_68.

Nanodiamonds embedded in shells

Neburkova, J., Vavra, J., Raabova, H., Pramanik G., Havlik, J., Cigler, P.
In Nanodiamonds. Advanced Material Analysis, Properties and Applications, Arnault, J.-C. (Ed.), Elsevier, 2017, pp. 339–363.

Anchored but not internalized: shape dependent endocytosis of nanodiamond

Zhang, B., Feng, X., Yin, H., Ge, Z., Wang, Y., Chu, Z., Raabova, H., Vavra, J., Cigler, P., Liu, R., Wang, Y., Li, Q.
Sci. Rep., 2017, 7, 46462 .

Optical imaging of localized chemical events using programmable diamond quantum nanosensors

Rendler, T., Neburkova, J., Zemek, O., Kotek, J., Zappe, A., Chu, Z., Cigler, P., Wrachtrup J.
Nat. Commun., 2017, 8, 14701.

Retargeting Polyomavirus-Like Particles to Cancer Cells by Chemical Modification of Capsid Surface

Zackova Suchanova, J., Neburkova, J., Spanielova, H., Forstova, J., Cigler, P.
Bioconjugate Chem., 2017, 28, 307–313.

Coating nanodiamonds with biocompatible shells for applications in biology and medicine

Neburkova, J., Vavra, J., Cigler, P.
Curr. Opin. Solid State Mater. Sci. 2017, 21, 43–53.

2016

Stealth Amphiphiles: Self-Assembly of Polyhedral Boron Clusters

Dordovic, V., Tosner, Z., Uchman, M., Zhigunov, A., Reza, M., Ruokolainen, J., Pramanik, G., Cigler, P., Kaliková, K., Gradzielski, M., Matejicek, P.
Langmuir 2016, 32, 6713–6722.

Photoluminescent Carbon Nanostructures

Kozak, O., Sudolska, M., Pramanik, G., Cigler, P., Otyepka, M., Zboril, R.
Chem. Mater. 2016, 28, 4085–4128.

Efficiency and Stability of Spectral Sensitization of Boron-Doped-Diamond Electrode through Covalent Anchoring of a Donor-Acceptor Organic Chromophore (P1)

Krysova, H., Barton, J., Petrak, V., Jurok, R., Kuchar, M., Cigler, P., Kavan, L.
Phys. Chem. Chem. Phys. 2016, 18, 16444-16450.

Imaging of transfection and intracellular release of intact, non-labeled DNA using fluorescent nanodiamonds

Petrakova, V., Benson, V., Buncek, M., Fiserova, A., Ledvina, M., Stursa, J., Cigler, P., Nesladek, M.
Nanoscale 2016, 8, 12002-12012.

Benchtop Fluorination of Fluorescent Nanodiamonds on a Preparative Scale: Toward Unusually Hydrophilic Bright Particles

Havlik, J., Raabova, H., Gulka, M., Petrakova, V., Krecmarova, M., Masek, V., Lousa, V., Stursa, J., Boyen, H. G., Nesladek, M., Cigler, P.
Adv. Funct. Mater. 2016, 26, 4134–4142.

Nanodiamonds: Behavior in Biological Systems and Emerging Bio-applications

Rehor, I., Slegerova, J., Havlik, J., Raabova, H., Hyvl, J., Muchova, E., Cigler, P.
In Carbon Nanomaterials for Biomedical Applications, Zhang, M., Naik, R. R., Dai, L. (Eds.)
http://www.springer.com/us/book/9783319228600, p. 319-361.

2015

Mass production of fluorescent nanodiamonds with a narrow emission intensity distribution

Stursa, J., Havlik, J., Petrakova, V., Gulka, M., Ralis, J., Zach, V., Pulec, V., Stepan, V., Abbasi Zargaleh, S., Ledvina, M., Nesladek, M., Treussart, F., Cigler, P.
Carbon 2015, 96, 812–818.

Charge-Sensitive Fluorescent Nanosensors Created from Nanodiamond

Petrakova, V., Rehor, I., Stursa, J., Ledvina, M., Nesladek, M., Cigler, P.
Nanoscale 2015, 7, 12307-12311.

Triggering HIV polyprotein processing by light using rapid photodegradation of a tight-binding protease inhibitor

Schimer, J., Pavova, M., Anders, M., Pachl, P., Sacha, P., Cigler, P., Weber, J., Majer, P., Rezacova, P., Krausslich, H.G., Muller, B., Konvalinka, J.
Nat. Commun. 2015, 6, 6461.

Designing the nanobiointerface of fluorescent nanodiamonds: highly selective targeting of glioma cancer cells

Slegerova, J., Hajek, M., Rehor, I., Sedlak, F., Stursa, J., Hruby, M., Cigler, P.
Nanoscale, 2015, 7, 415-420.

Visible-Light Sensitization of Boron-Doped Nanocrystalline Diamond through Non-covalent Surface Modification

Krysova, H., Vlckova-Zivcova, Z., Barton, J., Petrak, V., Nesladek, M., Cigler, P., Kavan, L.
Phys. Chem. Chem. Phys., 2015, 17, 1165-1172.

Carborane-β-cyclodextrin complexes as supramolecular connector for bioactive surfaces

Neirynck, P., Schimer, J., Jonkheijm, P., Milroy, L. G., Cigler, P., Brunsveld, L.
J. Mater. Chem. B , 2015, 3, 539-545.

Plasmonic Nanodiamonds: Targeted Core–Shell Type Nanoparticles for Cancer Cell Thermoablation

Rehor, I., Lee, K. L., Chen, K., Hajek, M., Havlik, J., Lokajova, J., Masat, M., Slegerova, J., Shukla, S., Heidari, H., Bals, S., Steinmetz, N. M., Cigler, P.
Adv. Healthc. Mater., 2015, 4, 460-468.

2014

Carborane-Based Carbonic Anhydrase Inhibitors: Insight into CAII/CAIX Specificity from a High-Resolution Crystal Structure, Modeling, and Quantum Chemical Calculations

Mader, P., Pecina, A., Cigler, P., Lepsik, M., Sicha, V., Hobza, P., Gruner, B., Fanfrlík, J., Brynda, J., Rezacova, P.
BioMed Res. Int., 2014, Article ID 389869

Nanodiamonds as Intracellular Probes for Imaging in Biology and Medicine.

Slegerova J., Rehor I., Havlik J., Raabova H., Muchova E., Cigler P.
In Intracellular Delivery II. Fundamental Biomedical Technologies, Prokop, A., Iwasaki, Y., Harada, A. (Eds.), 2014, Vol. 7, Dordrecht: Springer Netherlands; p. 363-401.

Unambiguous observation of shape effects on cellular fate of nanoparticles.

Chu, Z., Zhang, S., Zhang, B., Zhang, Ch., Fang, Ch.-Y., Rehor, I., Cigler, P., Chang, H.-C., Lin, G., Liu, R., Li, Q.
Sci. Rep., 2014, 4, 4495.

Nanodiamonds – Fluorescent and Imaging Nanoprobes.

Slegerova, J., Cigler, P.
Chem. Listy, 2014, 108, 387-393.

Precise Estimation of HPHT Nanodiamond Size Distribution Based on Transmission Electron Microscopy Image Analysis.

Rehor, I., Cigler, P.
Diamond Relat. Mater., 2014, 46, 21-24.

Fluorescent Nanodiamonds Embedded in Biocompatible Translucent Shells.

Rehor, I., Slegerova, J., Kucka, J., Proks, V., Petrakova, V., Adam, M.-P., Treussart, F., Turner, S., Bals, S., Sacha, P., Ledvina, M., Wen, A. M., Steinmetz, N. F., Cigler, P.
Small, 2014, 10(6), 1106–1115.

Fluorescent Nanodiamonds with Bioorthogonally Reactive Protein-Resistant Polymeric Coatings.

Rehor, I., Mackova, H., Filippov, S. K., Kucka, J., Proks, V., Slegerova, J., Turner, S., Van Tendeloo, G., Ledvina, M., Hruby, M. and Cigler, P.
ChemPlusChem, 2014, 79(1), 21-24.

2013

Rak, J., Dejlova, B., Lampova, H., Kaplanek, M., Matejicek, P., Cigler, P., Kral, I. (2013), On the Solubility and Lipophilicity of Metallacarborane Pharmacophores. Mol. Pharmaceutics,10 (5), 1751–1759.

Brynda, J., Mader, P., Šícha, V., Fábry, M., Poncová, K., Bakardiev, M., Grüner, B., Cígler, P.,  Řezáčová, P. (2013), Carborane-Based Carbonic Anhydrase Inhibitors. Angew. Chem. Int. Ed., 52(51),13760-13763.

Hofman, J., Buncek, M., Haluza, R., Streinz, L., Ledvina, Cigler P. (2013). In Vitro Transfection Mediated by Dendrigraft Poly(L-lysines): Effect of Structure and Molecule Size. Macromol. Biosci., 13(2), 167-176.

Havlik, J., Petrakova, V., Rehor, I., Petrak, V., Gulka, M., Stursa, J., Kucka, J., Ralis, J., Rendler, T., Lee, S.-Y., Reuter, R., Wrachtrup, J., Ledvina, M., Nesladek, M., Cigler P. (2013). Boosting Nanodiamond Fluorescence: Towards Development of Brighter Probes. Nanoscale, 5(8), 3208-3211.

2012

Schimer, J., Cígler, P., Veselý, J., Grantz Šašková, K., Lepšík, M., Brynda, J., Řezáčová, P., Kožíšek, M., Císařová, I., Oberwinkler, H., Kraeusslich, H.-G.,  Konvalinka, J. (2012). Structure-aided design of novel inhibitors of HIV protease based on a benzodiazepine scaffold. J. Med. Chem., 55(22), 10130–10135.

Briza, T., Kralova, J., Cigler, P., Kejik, Z., Pouckova, P., Vasek, P., Moserova, I., Martasek, P., Kral, V. (2012). Combination of two chromophores: Synthesis and PDT application of porphyrin-pentamethinium conjugate. Bioorg. Med. Chem. Lett., 22, 82–84.

Petrakova, V., Taylor, A., Kratochvilova, I., Fendrych, F., Vacik, J., Kucka, J., Stursa, J., Cigler, P., Ledvina, M., Fiserova, A., Kneppo, P., Nesladek, M. (2012). Luminescence of Nanodiamond Driven by Atomic Functionalization: Towards Novel Detection Principles. Adv. Funct. Mater.,22, 812–819.

2011

Petrakova, V., Nesladek, M., Taylor, A., Fendrych, F., Cigler, P., Ledvina, M., Vacik, J., Stursa, J., Kucka, J. (2011). Luminescence properties of engineered nitrogen vacancy centers in a close surface proximity. Phys. Status Solidi A, 208, 2051–2056.

2010

Cigler, P., Lytton-Jean, A.K.R., Anderson, D.G., Finn, M.G., Park, S.Y. (2010). DNA-controlled assembly of a NaTl lattice structure from gold nanoparticles and protein nanoparticles. Nat. Mater., 9, 918–922.

Kratochvilova, I., Kovalenko, A., Taylor, A., Fendrych, F., Rezacova, V., Vlcek, J., Zalis, S., Sebera, J., Cigler, P., Ledvina, M., Nesladek, M. (2010). The fluorescence of variously terminated nanodiamond particles: Quantum chemical calculations. Phys. Status Solidi A, 207, 2045–2048.

Uchman, M., Jurkiewicz, P., Cigler, P., Gruener, B., Hof, M., Prochazka, K., Matejicek, P. (2010). Interaction of Fluorescently Substituted Metallacarboranes with Cyclodextrins and Phospholipid Bilayers: Fluorescence and Light Scattering Study. Langmuir, 26, 6268–6275.

2009

Hoffman, H.E., Jiraskova, J., Cigler, P., Sanda, M., Schraml, J., Konvalinka, J. (2009). Hydroxamic Acids As a Novel Family of Serine Racemase Inhibitors: Mechanistic Analysis Reveals Different Modes of Interaction with the Pyridoxal-5'-phosphate Cofactor. J. Med. Chem., 52, 6032–6041.

Rezacova, P., Pokorna, J., Brynda, J., Kozisek, M., Cigler, P., Lepsik, M., Fanfrlik, J., Rezac, J., Saskova, K.G., Sieglova, I., Plesek, J., Sicha, V., Gruener, B., Oberwinkler, H., Sedlacek, J., Kraeusslich, H.-G., Hobza, P., Kral, V., Konvalinka, J. (2009). Design of HIV Protease Inhibitors Based on Inorganic Polyhedral Metallacarboranes. J. Med. Chem., 52, 7132–7141.

2008

Cigler, P., Kral, V., Kozisek, M., Konvalinka, J., Mirsky, V.M. (2008). Anomalous adsorptive properties of HIV protease: Indication of two-dimensional crystallization? Colloid. Surface. B, 64, 145–149.

Kozisek, M., Cigler, P., Lepsik, M., Fanfrlik, J., Rezacova, P., Brynda, J., Pokorna, J., Plesek, J., Gruner, B., Saskova, K.G., Vaclavikova, J., Kral, V., Konvalinka, J. (2008). Inorganic polyhedral metallacarborane inhibitors of HIV protease: A new approach to overcoming antiviral resistance. J. Med. Chem., 51, 4839–4843.

Matejicek, P., Cigler, P., Olejniczak, A.B., Andrysiak, A., Wojtczak, B., Prochazka, K., Lesnikowski, Z.J. (2008). Aggregation behavior of nucleoside-boron cluster conjugates in aqueous solutions. Langmuir, 24, 2625–2630.

Schraml, J., Cigler, P. (2008). (15)N-(1)H and (15)N-(13)C couplings in (15)N-enriched dihydroxamic acids. Magn. Reson. Chem., 46, 748–755.

2007

Kubat, P., Lang, K., Cigler, P., Kozisek, M., Matejicek, P., Janda, P., Zelinger, Z., Prochazka, K., Kral, V. (2007). Tetraphenylporphyrin-cobalt(III) bis(1,2-dicarbollide) conjugates: From the solution characteristics to inhibition of HIV protease. J. Phys. Chem. B, 111, 4539–4546.

2006

Matejicek, P., Cigler, P., Prochazka, K., Kral, V. (2006). Molecular assembly of metallacarboranes in water: Light scattering and microscopy study. Langmuir, 22, 575–581.

2005

Cigler, P., Kozisek, M., Rezacova, P., Brynda, J., Otwinowski, Z., Pokorna, J., Plesek, J., Gruner, B., Doleckova-Maresova, L., Masa, M., Sedlacek, J., Bodem, J., Krausslich, H.G., Kral, V., Konvalinka, J. (2005). From nonpeptide toward noncarbon protease inhibitors: Metallacarboranes as specific and potent inhibitors of HIV protease. P. Natl. Acad. Sci. USA,102, 15394–15399.

Rudovsky, J., Cigler, P., Kotek, J., Hermann, P., Vojtisek, P., Lukes, I., Peters, J.A., Vander Elst, L., Muller, R.N. (2005). Lanthanide(III) complexes of a mono (methylphosphonate) analogue of H(4)dota: The influence of protonation of the phosphonate moiety on the TSAP/SAP isomer ratio and the water exchange rate. Chem. Eur. J., 11, 2373–2384.

Vojtisek, P., Cigler, P., Kotek, J., Rudovsky, J., Hermann, P., Lukes, I. (2005). Crystal structures of lanthanide(III) complexes with cyclen derivative bearing three acetate and one methylphosphonate pendants. Inorg. Chem., 44, 5591–5599.

Book chapters

Řezáčová, P., Cígler, P., Matějíček, P., Lepšík, M.,  Pokorná, J., Grüner, B., Konvalinka, J. (2011). Medicinal Application of Carboranes: Inhibition of HIV Protease. In Boron Science: New Technologies and Applications, Hosmane, N. S. (Ed.). pp. 41-70, CRC Press.